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TOKSOY ÖNER, EBRU

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TOKSOY ÖNER

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2015 - 20192
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Has files: true × Subject: Halophiles ×

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    PublicationOpen Access
    Discovery of fructans in Archaea
    (ELSEVIER SCI LTD, 2019-09) TOKSOY ÖNER, EBRU; Kirtel, Onur; Lescrinier, Eveline; Van den Ende, Wim; Oner, Ebru Toksoy
    Fructans are fructose-based oligo-and polysaccharides derived from sucrose that occur in a plethora of Eubacteria and plants. While fructan-producing (fructanogenic) Eubacteria are abundant in hypersaline environments, fructan production by Archaea has never been reported before. Exopolysaccharides accumulated by various Archaea from the Halobacteria class (belonging to the genera of Halomicrobium, Haloferax and Natronococcus) originating from different locations on Earth were structurally characterized as either levans or inulins with varying branching degrees (10%-16%). Thus, we show for the first time in the literature that fructans are produced in all three domains of life, including Archaea. This proof of concept will not only provide insight into Archaeal glycans and evolution but it may also open new frontiers for innovative strategies to overcome the ever-increasing threat of excessive salinization.
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    PublicationOpen Access
    Genomic analysis reveals the biotechnological and industrial potential of levan producing halophilic extremophile, Halomonas smyrnensis AAD6T
    (SPRINGER INTERNATIONAL PUBLISHING AG, 2015-12) TOKSOY ÖNER, EBRU; Diken, Elif; Ozer, Tugba; Arikan, Muzaffer; Emrence, Zeliha; Oner, Ebru Toksoy; Ustek, Duran; Arga, Kazim Yalcin
    Halomonas smyrnensis AAD6T is a gram negative, aerobic, and moderately halophilic bacterium, and is known to produce high levels of levan with many potential uses in foods, feeds, cosmetics, pharmaceutical and chemical industries due to its outstanding properties. Here, the whole-genome analysis was performed to gain more insight about the biological mechanisms, and the whole-genome organization of the bacterium. Industrially crucial genes, including the levansucrase, were detected and the genome-scale metabolic model of H. smyrnensis AAD6T was reconstructed. The bacterium was found to have many potential applications in biotechnology not only being a levan producer, but also because of its capacity to produce Pel exopolysaccharide, polyhydroxyalkanoates, and osmoprotectants. The genomic information presented here will not only provide additional information to enhance our understanding of the genetic and metabolic network of halophilic bacteria, but also accelerate the research on systematical design of engineering strategies for biotechnology applications.