Person: ÇAKMAKÇI, EMRAH
Loading...
Email Address
Birth Date
Research Projects
Organizational Units
Job Title
Last Name
ÇAKMAKÇI
First Name
EMRAH
Name
8 results
Search Results
Now showing 1 - 8 of 8
Publication Metadata only Nonhydrolytic sol-gel synthesized oligosiloxane resin reinforced thiol-ene photocured coatings for the immobilization of acetylcholinesterase(SPRINGER, 2019) ÇAKMAKÇI, EMRAH; Cakmakci, Emrah; Demir, SerapAcetylcholinesterase (AChE), which is responsible for the hydrolysis of neurotransmitter acetylcholine, is a critical enzyme for the nervous system and also a biomarker for organophosphorous pesticide detection. The immobilization of AChE is an active area of research and recently the use of sol-gel-derived materials for enzyme immobilization has gained a lot of attraction. In this work, AChE was covalently immobilized onto a photocured substrate which was reinforced with an oligosiloxane resin. The oligosiloxane resin was designed to have both vinyl and epoxide groups and prepared via nonhydrolytic sol-gel technique. The strategy employed in this study offered a platform that has good mechanical and thermal properties and also suitable for modification. Thus, AChE was also immobilized onto these substrates after amine modification of the epoxy groups and followed by glutaraldehyde activation. Over 80% enzyme immobilization yield was achieved. At certain pH values (5.5 and 8.5) and under relatively higher temperatures (above 40 degrees C) the immobilized enzymes were found to have higher catalytic activity than the free enzyme. Furthermore, by immobilization the reuse and the storage stability of the enzyme was improved and the stability of the immobilized enzyme against the inhibitory effects of certain metal cations was enhanced [GRAPHICS] . Nonhydrolytic sol-gel synthesized oligosiloxane resin reinforced thiol-ene photocured coatings for the immobilization of acetylcholinesterase. Emrah CAKMAKCI, Serap DEMIR. HighlightsAn oligosiloxane resin was prepared via nonhydrolytic sol-gel technique.The oligosiloxane resin was used to reinforce thiol-ene photocured coatings.Acetylcholinesterase was immobilized onto the photocured coatings.By immobilization, storage stability, reuse and metal ion resistance were improved.Publication Open Access Immobilization of acetylcholinesterase onto pyrrole-containing photocured thermosets(2023-04-01) DEMİR, SERAP; ÇAKMAKÇI, EMRAH; OGAN, AYŞE; ALI K. K., DEMİR S., ÇAKMAKÇI E., OGAN A.Acetylcholinesterase (AChE; EC 3.1.1.7) is a group of enzymes that catalyzes the hydrolysis of the neurotransmitter acetylcholine (ACh) into choline and acetate. AChE inhibition is commonly utilized as a biomarker for pesticides. In membrane based AChE biosensors the enzyme immobilization onto an electrode surface is of prime importance. In previous studies, conducting polymers-based supports have been used for the immobilization of AChE. In this study, a novel immobilization platform was developed. The simultaneous polymerization of pyrrole and functional thiol/ene monomers was performed to prepare conductive thermosets. AchE was covalently immobilized onto the membranes through the epoxy functional groups. After the immobilization process, the optimal temperature increased to 50 °C, displaying a better thermal stability and the optimum pH was elevated to 8.5. The activity of the immobilized enzyme was tested in the presence of several metals, and it was found that Cu2+ ions caused a noticable inhibition. After 10 cycles, the immobilized enzyme retained 51% of its original activity. In accordance with our results; the durability and the stability of the immobilized enzyme were improved. In future studies, the method applied here can be used in the design of an AchE biosensor.Publication Metadata only Physical and Covalent Immobilization of Lipase onto Amine Groups Bearing Thiol-Ene Photocured Coatings(HUMANA PRESS INC, 2017) ÇAKMAKÇI, EMRAH; Cakmakci, Emrah; Muhsir, Pelin; Demir, SerapIn this study, amine groups containing thiol-ene photocurable coating material for lipase immobilization were prepared. Lipase (EC 3.1.1.3) from Candida rugosa was immobilized onto the photocured coatings by physical adsorption and glutaraldehyde-activated covalent bonding methods, respectively. The catalytic efficiency of the immobilized and free enzymes was determined for the hydrolysis of p-nitrophenyl palmitate and also for the synthesis of p-nitrophenyl linoleate. The storage stability and the reusability of the immobilized enzyme and the effect of temperature and pH on the catalytic activities were also investigated. The optimum pH for free lipase and physically immobilized lipase was determined as 7.0, while it was found as 7.5 for the covalent immobilization. After immobilization, the optimum temperature increased from 37 A degrees C (free lipase) to 50-55 A degrees C. In the end of 15 repeated cycles, covalently bounded enzyme retained 60 and 70 % of its initial activities for hydrolytic and synthetic assays, respectively. While the physically bounded enzyme retained only 56 % of its hydrolytic activity and 67 % of its synthetic activity in the same cycle period. In the case of hydrolysis V (max) values slightly decreased after immobilization. For synthetic assay, the V (max) value for the covalently immobilized lipase was found as same as free lipase while it decreased dramatically for the physically immobilized lipase. Physically immobilized enzyme was found to be superior over covalent bonding in terms of enzyme loading capacity and optimum temperature and exhibited comparable re-use values and storage stability. Thus, a fast, easy, and less laborious method for lipase immobilization was developed.Publication Metadata only Preparation, characterization, and in vitro evaluation of isoniazid and rifampicin-loaded archaeosomes(WILEY, 2018) OGAN, AYŞE; Attar, Azade; Bakir, Ceren; Yuce-Dursun, Basak; Demir, Serap; Cakmakci, Emrah; Danis, Ozkan; Birbir, Meral; Ogan, AyseThe ability of Archaea to adapt their membrane lipid compositions to extreme environments has brought in archaeosomes into consideration for the development of drug delivery systems overcoming the physical, biological blockades that the body exhibits against drug therapies. In this study, we prepared unilamellar archaeosomes, from the polar lipid fraction extracted from Haloarcula 2TK2 strain, and explored its potential as a drug delivery vehicle. Rifampicin and isoniazid which are conventional drugs in tuberculosis medication were loaded separately and together in the same archaeosome formulation for the benefits of the combined therapy. Particle size and zeta potential of archaeosomes were measured by photon correlation spectroscopy, and the morphology was assessed by with an atomic force microscope. Encapsulation efficiency and loading capacities of the drugs were determined, and in vitro drug releases were monitored spectrophotometrically. Our study demonstrates that rifampicin and isoniazid could be successfully loaded separately and together in archaeosomes with reasonable drug-loading and desired vesicle-specific characters. Both of the drugs had greater affinity for archaeosomes than a conventional liposome formulation. The results imply that archaeosomes prepared from extremely halophilic archaeon were compatible with the liposomes for the development of stable and sustained release of antituberculosis drugs.Publication Metadata only Alpha-Amylase Immobilization on Epoxy Containing Thiol-Ene Photocurable Materials(KOREAN SOC MICROBIOLOGY & BIOTECHNOLOGY, 2013) ÇAKMAKÇI, EMRAH; Cakmakci, Emrah; Danis, Ozkan; Demir, Serap; Mulazim, Yusuf; Kahraman, Memet VezirThiol-ene polymerization is a versatile tool for several applications. Here we report the preparation of epoxide groups containing thiol-ene photocurable polymeric support and the covalent immobilization of alpha-amylase onto these polymeric materials. The morphology of the polymeric support was characterized by scanning electron microscopy (SEM), and energy dispersive spectroscopy (EDS) coupled with SEM was used to explore the chemical composition. The polymeric support and the immobilization of the enzyme were characterized by FTIR analysis. SEM-EDS and FTIR results showed that the enzyme was successfully covalently attached to the polymeric support. The immobilization efficiency and enzyme activity of alpha-amylase were examined at various pH (5.0-8.0) and temperature (30-80 degrees C) values. The storage stability and reusability of immobilized alpha-amylase were investigated. The immobilization yield was 276 +/- 1.6 mg per gram of polymeric support. Enzyme assays demonstrated that the immobilized enzyme exhibited better thermostability than the free one. The storage stability and reusability were improved by the immobilization on this enzyme support. Free enzyme lost its activity completely within 15 days. On the other hand, the immobilized enzyme retained 86.7% of its activity after 30 days. These results confirm that alpha-amylase was successfully immobilized and gained a more stable character compared with the free one.Publication Metadata only Immobilization of alpha- amylase on aminated polyimide membrane: Preparation, characterization, and properties(WILEY-V C H VERLAG GMBH, 2014) ÇAKMAKÇI, EMRAH; Cakmakci, Emrah; Cigil, Asli Beyler; Danis, Ozkan; Demir, Serap; Kahraman, Memet Vezir-amylase was covalently immobilized on functionalized polyimide (PI) membranes via glutaraldehyde (GA) activation. 3,3,4,4-Benzophenonetetracarboxylic acid dianhydride (BTDA) and 4,4-oxydianline (4,4-ODA) based polyimide membranes were obtained via thermal imidization. Free amine groups on the surface of the polyimide membranes were generated by the amination reaction of polyimides with hexamethylenediamine (HMDA). Surface-aminated membranes were subjected to enzyme immobilization after GA activation. Immobilization efficiency and enzyme activity of -amylase was examined at various pH (3.0-8.0) and temperature (15-80 degrees C). The storage stability and reusability of immobilized -amylase were investigated. Immobilization yield was found as 359.53mg per gram of modified polyimide films. Enzyme assays demonstrated that the immobilized enzyme exhibited better thermo stability than the free one. The storage stability and reusability improved by the immobilization on this enzyme support. Free enzyme lost its activity completely within 15 days. On the other hand, the immobilized enzyme retained 79.98% of its activity after 30 days. These results confirmed that -amylase was successfully immobilized and gained more stable character compared to the free enzyme.Publication Metadata only Amine functional magnetic nanoparticles via waterborne thiol-ene suspension photopolymerization for antibody immobilization(ELSEVIER SCIENCE BV, 2018) OGAN, AYŞE; Muhsir, Pelin; Cakmakci, Emrah; Demir, Serap; Ogan, AyseThe modification of magnetic nanoparticles (MNPs) via different routes for biomolecule binding is an attractive area of research. Waterborne thiol-ene suspension photopolymerization (TESP) can be a useful method for preparing functional MNPs. In this study, for the very first time waterborne TESP was performed in the presence of MNPs. Neat MNPs were coated and in situ functionalized with amine groups by using thiol-ene chemistry. Engrailed-2 (EN2) protein, a potential biomarker for various cancers such as prostate cancer, bladder cancer, breast cancer and ovarian cancer, is known to be a strong binder to a specific DNA sequence (50-TAATTA-30) to regulate transcription. Anti-EN2 antibodies were immobilized onto these MNPs by physical adsorption and covalent bonding methods, respectively. The amount of the physically immobilized antibodies (0.54 mg/g) were found to be lower than the loading of the covalently bonded antibodies (1.775 mg/g). The biomarker level in the artificial solutions prepared was determined by enzyme-linked immunosorbent assay. Coated MNPs were characterized by FTIR, TGA, SEM and STEM. After TESP, the average diameter of the neat magnetite nanoparticles increased from similar to 15 nm to similar to 32 nm.Publication Metadata only Maleic anhydride functionalization of OSTE based coatings via thiol-ene Click reaction for the covalent immobilization of xylanase(ELSEVIER, 2017) ÇAKMAKÇI, EMRAH; Cakmakci, Emrah; Yuce-Dursun, Basak; Demir, SerapCombination of Off-Stoichiometry Thiol-Ene (OSTE) polymers with thiol-ene Click reaction is a versatile method for the development of advanced functional materials. In this study OSTE based photocurable coating materials with excess thiol groups on the surface were prepared and functionalized with maleic anhydride via thiol-ene Click reaction. Xylanase enzyme was then covalently immobilized onto these coatings. Maleic anhydride functionalization of the prepared OSTE coatings was proved by FTIR and contact angle measurements. The developed functional support was found to have high affinity for xylanase enzyme and the immobilization capacity was determined as 212 mg g(-1). Almost 100% of immobilization yield was achieved. Immobilization significantly improved the stability of the xylanase at pH values over 6.5 and temperatures exceeding 60 degrees C. Moreover the immobilized xylanase exhibited superior reusability and storage stability compared to free xylanase. (C) 2016 Elsevier B.V. All rights reserved.