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Genomic analysis reveals the biotechnological and industrial potential of levan producing halophilic extremophile, Halomonas smyrnensis AAD6T

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dc.contributor.authorTOKSOY ÖNER, EBRU
dc.contributor.authorsDiken, Elif; Ozer, Tugba; Arikan, Muzaffer; Emrence, Zeliha; Oner, Ebru Toksoy; Ustek, Duran; Arga, Kazim Yalcin
dc.date.accessioned2022-03-14T11:04:13Z
dc.date.available2022-03-14T11:04:13Z
dc.date.issued2015-12
dc.description.abstractHalomonas smyrnensis AAD6T is a gram negative, aerobic, and moderately halophilic bacterium, and is known to produce high levels of levan with many potential uses in foods, feeds, cosmetics, pharmaceutical and chemical industries due to its outstanding properties. Here, the whole-genome analysis was performed to gain more insight about the biological mechanisms, and the whole-genome organization of the bacterium. Industrially crucial genes, including the levansucrase, were detected and the genome-scale metabolic model of H. smyrnensis AAD6T was reconstructed. The bacterium was found to have many potential applications in biotechnology not only being a levan producer, but also because of its capacity to produce Pel exopolysaccharide, polyhydroxyalkanoates, and osmoprotectants. The genomic information presented here will not only provide additional information to enhance our understanding of the genetic and metabolic network of halophilic bacteria, but also accelerate the research on systematical design of engineering strategies for biotechnology applications.
dc.identifier.doi10.1186/s40064-015-1184-3
dc.identifier.issn2193-1801
dc.identifier.pubmed26251777
dc.identifier.urihttps://hdl.handle.net/11424/245826
dc.identifier.wosWOS:000359435700004
dc.language.isoeng
dc.publisherSPRINGER INTERNATIONAL PUBLISHING AG
dc.relation.ispartofSPRINGERPLUS
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectHalomonas smyrnensis
dc.subjectHalophiles
dc.subjectGenome
dc.subjectNext-generation sequencing
dc.subjectLevan
dc.subjectGLYCINE BETAINE
dc.subjectBINDING-PROTEIN
dc.subjectBACTERIUM
dc.subjectSEQUENCE
dc.subjectEXOPOLYSACCHARIDE
dc.subjectFILMS
dc.titleGenomic analysis reveals the biotechnological and industrial potential of levan producing halophilic extremophile, Halomonas smyrnensis AAD6T
dc.typearticle
dspace.entity.typePublication
local.avesis.ide456d677-bf3b-4ac7-8aab-0aac5f23292b
local.import.packageSS16
local.indexed.atWOS
local.indexed.atSCOPUS
local.indexed.atPUBMED
local.journal.articlenumber393
local.journal.numberofpages11
oaire.citation.titleSPRINGERPLUS
oaire.citation.volume4
relation.isAuthorOfPublication6118e9e4-a58e-429b-bbec-4f73a3089a2b
relation.isAuthorOfPublication.latestForDiscovery6118e9e4-a58e-429b-bbec-4f73a3089a2b

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