Publication:
Comparative Proteome Analyses of Ureteropelvic Junction Obstruction and Surrounding Ureteral Tissue

dc.contributor.authorsGormus, Uzay; Kasap, Murat; Akpinar, Gurler; Tugtepe, Halil; Kanli, Aylin; Ozel, Kerem
dc.date.accessioned2022-03-12T22:54:42Z
dc.date.accessioned2026-01-10T18:34:39Z
dc.date.available2022-03-12T22:54:42Z
dc.date.issued2020
dc.description.abstractUreteropelvic junction (UPJ) obstruction is a common problem in children, but its etiology remains unclear. In this study, the proteome profiles of the obstructed segment and its surrounding distal and proximal parts were comparatively evaluated. Twelve children younger than 2 years of age with unilateral intrinsic UPJ obstruction were included. The excised operational tissue was divided into three parts immediately after resection: the obstructed part (Obst), the distal normal ureteral part (Dist), and the proximal part of the obstructed segment (Prox). Proteins extracted from the tissue samples were subjected to two-dimensional gel electrophoresis analysis to identify differentially regulated proteins. Spot analysis revealed that four proteins, namely tropomyosin beta and alpha-1 chains, actin and desmin, were upregulated in Obst in comparison to Dist. A similar analysis between Obst and Prox showed that heat shock protein beta-1 and carbonic anhydrase-1 were upregulated in Obst, while tropomyosin alpha 3 chain and ATP synthase beta were upregulated in Prox. The last comparative analysis between Dist and Prox revealed upregulation of annexin-A5 and annexin-A1 in Dist and vimentin, mitochondrial ATP synthase subunit-beta, peroxiredoxin-2, and apolipoprotein-A1 in Prox. Bioinformatics analysis using the STRING server indicated that the differentially regulated proteins, altogether, point to the changes occurring in muscle filament sliding pathway. When regulations occurring in each group were mutually compared, a change in lipase inhibition activity was detected by STRING. This is the first study scrutinizing changes occurring in protein profiles in UPJ.
dc.identifier.doi10.1159/000506736
dc.identifier.eissn1422-6421
dc.identifier.issn1422-6405
dc.identifier.pubmed32259813
dc.identifier.urihttps://hdl.handle.net/11424/236475
dc.identifier.wosWOS:000604339200001
dc.language.isoeng
dc.publisherKARGER
dc.relation.ispartofCELLS TISSUES ORGANS
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectUreteropelvic junction obstruction
dc.subjectSTRING analysis
dc.subjectProteomics
dc.subjectSTRUCTURAL-CHANGES
dc.subjectSMOOTH-MUSCLE
dc.subjectCELLS
dc.subjectRESISTANCE
dc.subjectAPOPTOSIS
dc.subjectAUTOPHAGY
dc.subjectCOLLAGEN
dc.titleComparative Proteome Analyses of Ureteropelvic Junction Obstruction and Surrounding Ureteral Tissue
dc.typearticle
dspace.entity.typePublication
oaire.citation.endPage12
oaire.citation.issue1
oaire.citation.startPage2
oaire.citation.titleCELLS TISSUES ORGANS
oaire.citation.volume209

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